PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do025833.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 417aa    MW: 43214.9 Da    PI: 4.8094
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do025833.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.52.9e-13225273553
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                 + +rrkq+NRe+ArrsR RK a + eLe  v++L  eN++L  +l   +
  Do025833.1 225 RLQRRKQSNRESARRSRSRKAAHLNELEAQVAQLRVENSSLLRRLADVN 273
                 679**************************************98886655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-15221285IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.07223278IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-9224276No hitNo description
PfamPF001703.1E-10225273IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-9225274No hitNo description
PfamPF124981.8E-49292410IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MERVFSVEEI PNPYWAPPHP QAAATGAVPP LGGGGGGGVG GVGDDGAGAM NRCSSEWYLQ  60
KFLEEAVLDS PGPVAGVGRG GGVVGAEAAE SKPLGVAAAA AASSAAVDPV EFNAMLKQKL  120
EKDLAAVAMW RASSATPPER SVAGSSLPNV DVSHAGPINP IGGNGIPVQN KLAVAPVGGS  180
GLQVVQNADI LVKQATSSSS REQSDDDDME GEAETTGNAN PVQQRLQRRK QSNRESARRS  240
RSRKAAHLNE LEAQVAQLRV ENSSLLRRLA DVNHKFNEAA VDNRVLKADV ETLRAKVKMA  300
EDSVKRVTGM NALFPAVSDI SSLSMPFNGS PSDSTSDAAV PTQDDPNSYF ASPSEIGVNN  360
GYMPEIASSA QEDEDLVNAA LAAAGKMDRT DSLQRVASLE HLQKRMCGGP ASSGSTS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004981429.10.0PREDICTED: light-inducible protein CPRF2-like
TrEMBLK4A8560.0K4A856_SETIT; Uncharacterized protein
STRINGSi035062m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-40bZIP family protein